The following objects are masked from 'package:base':
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Error Issue of DiffBind (Deseq2) R package
Last edited by s18692001; 04-26-2017, 05:32 AM. -
DiffBind read counts normalisations
Is there a way to turn off the normalisation by the library size (either full or effective) in DiffBind?
The problem is that I the bam... -
DiffBind error- bad magic number
Hello everyone,
I am having problems running diffbind count function. I keep getting the following error (running in R on Mac):
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DiffBind: error with dba.count
Hello,
I've been using DiffBind to analyze some ATAC-seq peak data. Briefly, peaks in these datasets represent sites of open chromatin.... -
Chips-seq replicates and motif discovery: how to deal with the merged peaks?
I have chip-seq triplicate (3 treatment, 3 controls, each of the 6 with their input control). I have identified the peaks using macs14 for each sample... -
Combination of paired-end and single-end samples in Chip-seq TF study
I have 2 batches of chip-seq samples:
(A) One biological SE replicate
This batch, actually, consists of 4 SE Chip-seq samples...Last edited by feralBiologist; 11-23-2013, 11:51 AM.
