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EdgeR confusion with no replicates
I have four samples(no replicates) in a merged raw counts file from HTSeq. I'm confused on how to create the DGEList and counts via rnbinomial in order...
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cuffdiff - the -c parameter
Hello,
I'm running cuffdiff for DE.
I'm running with -c parameter as 10. I'm gettig test OK, while the raw counts at that...