Hi all,
I just did some paired end ATAC-seq and I have been trying to analyse the data. I align with Bowtie, remove mitochondrial reads,...
2 results in 0.0020 seconds.
-
Lose of paired-end info after samtools markdup
Last edited by ishtiaqueh; 04-20-2021, 04:19 PM. -
Duplicates and targeted sequencing
I am trying to analyze data that sequenced targeted regions of the genome (about 500 Mb in total). In the GATK pipeline it suggests marking duplicates/removing...
