Hi All,
We are using Erange 4.0 to do analysis on a pair of human RNASeq data generated on Illumina HiSeq 2000. We are running runRNAPairedAnalysis.sh...
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RNASeq analysis using Erange
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Blat vs bowtie/tophat on Rnaseq data
Dear all,
This is my first thread here, so hello everyone!

I am new in the field, so I hope my questions are not too trivial and...
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Bowtie and ERANGE
Hi,
We're planning on using the Mortazavi ERANGE package for quantifying gene expression in our rna-seq data. An aligner must be used for...
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ERANGE: map to transcriptome
Hi All,
I am attempting to get ERANGE up and running but have a few questions before I commit more time to it.
Specifically, after...
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Multiple index files in Bowtie?
Hello Everyone,
I am working on a 32 bit RH Linux machine and setting up a RNASeq analysis pipeline. As part of ERANGE, I am building an...
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ERANGE and other packages for RNAseq analysis
Hi everyone,
I am currently exploring the ERANGE package and was wondering whether there are other available packages like this to identify...