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CarambaKaracho started a topic existing tool to extract sequence ranges from multifasta file

in Bioinformatics

06-30-2016, 12:44 AM
existing tool to extract sequence ranges from multifasta file

I can't believe there's been no solution for this problem in 2016, but I seem to be incapable to find it.

Does anyone of you know some tool...

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DrYak started a topic Subsetting a fasta file based on a set of BLAST results

in Bioinformatics

10-02-2015, 03:33 AM
Subsetting a fasta file based on a set of BLAST results

Hi,

I have assembled a de novo transcriptome from my species of interest using trinity. The species has an internal symbiont (algae) and...

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floem7 started a topic Extract reference and aligned sequences from BAM file basing on VCF file

in Bioinformatics

01-17-2015, 03:22 PM
Extract reference and aligned sequences from BAM file basing on VCF file

I couldn't find relevant information. I hope it's not duplicate.

I have resequencing data for two maize lines (BAM and VCF files).
...

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Last edited by floem7; 01-17-2015, 03:24 PM. Reason: Adding info.

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