Hello,
I am a beginner in analyzing data from an RNA seq experiment. I was not the one performing the bioinformatics analysis (I am more...
6 results in 0.0021 seconds.
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Beginner question for Differential Expression Analysis
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change default FDR on edgeR
Hi,
Could anyone please tell me how to change the FDR from default (0.05) to 0.0001 in edgeR?
et <- exactTest(y, pair=c("1","2"))... -
fdr and p-values for NGS comparison ttest
Hello, I am new to NGS analysis, but that's the task I've been assigned. I have received NGS data that I am trying to decipher.
I am attempting... -
pval adjustment
Why do the DESeq2/DEXSeq vignettes use p-value adjustment by the "BH" method, instead of the "BY" method? Shouldn't the latter be... -
multiple testing correction question
in bioinformatics, you'll probably run into the multiple testing correction problem at some time of the analysis.. I have read several places online,... -
miRNA differential expression (DESeq)
Hi everyone!
I'm currently analyzing small-RNA-seq illumina data coming from 4 different samples. I have data coming from 2 biological replicates...
