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will.jackson started a topic Problems with CEGMA dependency installation

in Bioinformatics

08-25-2013, 07:25 PM
Problems with CEGMA dependency installation

Hi everyone,
I am having trouble installing wise2.2.3-rc7 for running CEGMA. This is the version that the authors of CEGMA recommend but I run...

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chris_bioinfo started a topic extracting reads from sam/bam file gene wise

in Bioinformatics

07-24-2013, 04:58 AM
extracting reads from sam/bam file gene wise

Dear All,

I have aligned Illumina transcriptome data ( paired-end 100bp) onto genes using bowtie2, which consists of ~10,000 genes....

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