Hi,
using:
flagL <- scanBamFlag(isDuplicate=FALSE, isNotPassingQualityControls=FALSE)
ParamL <- ScanBamParam(flag =...
2 results in 0.0021 seconds.
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genomicAlignments package in R
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summarizeOverlaps too, too slow then freeze
I hope someone can help in this issue.
I have 8 bam files from mm9 alignment, each ~4-5 geg in size. When I run summarizeOverlaps...Last edited by habbas; 12-29-2014, 02:37 PM.
