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dukzilla started a topic Why has no one ported popluar aligners to GPGPU code?

in Bioinformatics

08-16-2011, 03:02 PM
Why has no one ported popluar aligners to GPGPU code?

Has anyone attempted to convert BWA, bowtie, bfast, etc to work on GPGPU? If not, why?

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mkeehan started a topic actual use of GPGPUs

in Bioinformatics

10-10-2010, 04:13 PM
actual use of GPGPUs

Is anyone actually successfully using GPGPU based hardware for next Gen Sequencing use?

I've heard of one organisation using GPU-HMMER...

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