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Post GWAS Interpretation
I’m interpreting GWAS data for a project, from the data I extracted 3 lead SNPs and created LD plots for each using haploview. Now that I have the locations/bp... -
haploview using plink files
Hello everyone,
I was wondering if anyone knows how to construct LD plots from plink data in haploview? I read the documentation and my files... -
Haploview CI
Hi everyone,
I was hoping one of you could help me out with a Haploview question.
The D' value of one of the SNP pairs that I tested... -
Haploview tag snp command line
Hi
I want to define haplotype blocks with haploview. I am familiar with tagger algorithm but I want to select SNP in haplotype blocks.... -
Help with Haploview / gPlink
Hi!
I'm hoping someone has encountered my problem before! I am working with Illumina HD canine array data. I am trying to get LD data... -
How to view plink *.ld output
Hello,
I am a newbie in this avenue and I have just managed to generate some population sequencing data. I have generated the vcf files using Unified...
