Has anyone tried and succeeded in using the newest human genome version (T2T) in Kraken2 instead of the human hg38?
There are rumors that...
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Using Kraken2 with the human telomere to telomere genome (T2T)
Last edited by tatianaorli; 11-30-2023, 04:27 AM. -
Bowtie2 mode for Host decontamination of metagenomic samples using proxy species
Hi,
We are profiling the taxonomy of microbial communities on boreal mosses. These mosses' genome have never been sequenced. We are using Kneaddata... -
Removing host sequences
I am doing NGS on DNA from pig tissues to detect possible microbes in such samples. To reduce the amount of sequences (Ion Torrent) to be analyzed I would...
