4 results in 0.0028 seconds.
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SNPs at Interval Boundaries in GATK HaplotypeCaller
I'm using HaplotypeCaller with the -L option, where I explicitly state the interval. I am trying to break my task into pieces and assign it to different... -
Less SNVs with larger interval file - MuTect
Hi,
I've used MuTect to call variants on .bam files (standard procedure for exome seq, tumor vs normal) using two different interval files (both... -
Difference between bait and target region
Hi all,
I am using CalculateHsMetrics.jar of PicardTools.
Although I defined my targetinterval exactly the same as my bait interval... -
align target sequence
Hello,
I have used the GATKv3.0 pipeline to align and call variants on whole exome data. Recently, i was asked to get the variants from raw data...
