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Lukas Hellmann started a topic Java problem when using BBmap

in Bioinformatics

10-23-2017, 04:52 AM
Java problem when using BBmap

Hi guys,

I am working on a cluster that was changed to CentOS 7.3.1611 and SLURM scheduler recently. Since the change I cannot use any of...

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Last edited by Lukas Hellmann; 10-23-2017, 05:10 AM.
gwilymh started a topic How best to use --bflyHeapSpaceMax and --bflyGCThreads on Trinity

in Bioinformatics

05-13-2015, 01:56 PM
How best to use --bflyHeapSpaceMax and --bflyGCThreads on Trinity

I am currently using trinity v2.6.0. My jobs keep crashing at the butterfly stage of the analysis, with such error messages as:
succeeded(1008),...

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jialovelyjia started a topic A problem about BLAST2GO

in RNA Sequencing

11-05-2014, 11:34 PM
A problem about BLAST2GO

Hello,everyone!
Recently, I was performing the analysis of transcriptome. I want to perform GO enrichment analysis using BLAST2GO. But when I run...

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unagaswamy started a topic Samtools IO error

in Bioinformatics

11-04-2010, 08:39 AM
Samtools IO error

Hi Experts,
I am trying to use samtools to remove duplicates and bad reads from a BAM file. I get the following IO error. Does this mean I don't...

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