Has anyone tried and succeeded in using the newest human genome version (T2T) in Kraken2 instead of the human hg38?
There are rumors that...
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Using Kraken2 with the human telomere to telomere genome (T2T)
Last edited by tatianaorli; 11-30-2023, 04:27 AM. -
AzizNasr started a topic Kraken2 - unmapped sequences during the first step of building the databasein MetagenomicsKraken2 - unmapped sequences during the first step of building the database
Hello,
I am trying to build a costumed database, including all reference genomes of fungi, bacteria, archaea, viruses, and Homo sapiens.
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Metagenomic Taxonomic Profiling (beginner)
Hello, a little bit about myself. I'm a first year bioinformatic grad student who somehow got himself into a mock metagenomic project (there will be an... -
Metagenomic read classifier
Hello,
I will be doing metagenomic sequencing on clinical samples with >99% expected human reads and few microbial reads, with the microbial...
