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yuelincoln started a topic How to deal with this problem? Reordersam treat bam file

in The Pipeline

11-10-2014, 06:22 AM
How to deal with this problem? Reordersam treat bam file

##### ERROR A USER ERROR has occurred (version 3.2-2-gec30cee):
##### ERROR
##### ERROR This means that one or more arguments or inputs...

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gmarco started a topic Sort bed file by chr order and not lexicographically

in Bioinformatics

07-19-2013, 04:57 AM
Sort bed file by chr order and not lexicographically

I've been trying to sort a bed file with bedtools and bedops.

Both seem to sort the bed file lexicographically.

That means if...

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