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Examining possible extraneous variables in RNA-sequencing data
I have an RNA-sequencing dataset with 48 samples. I have a list of several possible extraneous variable values for each of the 48 samples. Some of these... -
Limma multifactor experiment design matrix
Hi, so I am very confused as to how I can make a multifactor design for limma RNA differential expression. I've read other posts in different forums and... -
Blocking and using contrasts in voom (limma) (RNAseq)
I am having trouble making the contrast matrix when I am using library preparation type (e.g. paired-end, single-end) as an addition variable in the model... -
Limma Voom Differential Splicing diffSplice() error
Hi,
I've been following the user's guide for Limma voom to perform differential splicing analysis and I have encountered a few problems....Last edited by Anomilie; 08-04-2014, 08:17 PM.
