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Anna Nad started a topic more counts than total library size ?

in Bioinformatics

11-07-2012, 03:05 PM
more counts than total library size ?

Hello,
I have mRNASeq data displaying counts per splice variants of mRNA, and I was just wondering how it is possible that the total number of...

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bioinfosm started a topic MAQ paired end mapping statistic

in Bioinformatics

10-13-2009, 08:20 AM
MAQ paired end mapping statistic

Here is a sample stdout when using maq for paired-end reads.
# reads mapped in pairs is an odd number. How can that be?
94% reads mapped,...

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simonandrews started a topic SeqMonk - Flexible analysis of mapped reads

in Bioinformatics

07-21-2009, 04:29 AM
SeqMonk - Flexible analysis of mapped reads

http://www.bioinformatics.bbsrc.ac.uk/projects/seqmonk/

SeqMonk is a visualisation and analysis package for mapped read data. It is designed...

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