Hi
I'm starting to use bfast and I have some doubts about some indexing parameters.
When indexing do I have to do it with the...
4 results in 0.0043 seconds.
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Why does Cufflinks with mask (-M) option have lower FPKM for mRNA genes?
Dear all,
I was curious how much the -M (mask file) option can improve the FPKM from Cufflinks. From the mannual, it says
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Using maskFileDir in Scripture
Hello,
I am trying to use Scripture to analyse RNAseq data from Arabidopsis. My idea is to first run Scripture on the Arabidopsis gtf file to obtain... -
Mask x number of bases WITHIN sequence prior to alignment
Hi all,
As you may see from the picture I have this QC from all R2 reads of my Paired End sequenced samples. Due to a technical error during...
