I'm using a linux server to run progressiveMauve to align 2 genomes of the same species for synteny analysis. But I kept encounter this issue:
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10 results in 0.0023 seconds.
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Mauve 'std::ios_base::failure'
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progressivemauve sequences missing from output
Dear all,
I recently ran a progressivemauve alignment of 266 bacterial sequences (~1x10^6 bp each). This completed with no errors, however... -
MAUVE reordered contigs
Hi all,
Forgive me if this had been asked before. Here is my question:
I am going to use mauve to make a multiple genome alignment...Last edited by doublealice; 06-18-2017, 07:46 PM. -
Mauve exited with error code 11
Greetings,
First of all, I would like to congratulate Koadman and all the team for have developed such an amazing tool as Mauve.
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Question: Looking for a genome /draft genome aligner with the these features
I have assembled a draft genome of s. pombe that I would like to compare to the reference. My purpose is to study structural variations (rearrangements,...Last edited by antifolate; 11-24-2015, 09:23 AM. -
Extracting Unmapped Contigs
Hello,
I've assembled some contigs from a sequenced strain and aligned them back to the reference with Mauve. I'm interested in studying... -
Progressive Mauve error
Hi all,
I'm trying to run progressive mauve on three Drosophila genomes with the following command,
/data/programs/mauve_2.4.0/linux-x64/progressiveMauve... -
Mauve LCB slider not visible
Hi all,
I am trying to use Mauve (version 2.3.1 installed on mac OS X 10.5.8) to generate a multiple alignment of four closely related...Last edited by sparky; 08-26-2014, 11:48 PM. -
Using multiple genome aligner and outputing SNP file
Hi everyone,
I'm looking for a multiple genome aligner that outputs a file containing all the positions of the SNPs. I've tried using Mauve,... -
progressiveMauve Orthologs Output
I'm aligning 9 prokaryotic genomes, 7 of which are annotated and two are not. In the manual, on the bottom of the Mauve Output File Formats page, it...
