41 results in 0.0041 seconds.
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Metagenomic Taxonomic Profiling (beginner)
Hello, a little bit about myself. I'm a first year bioinformatic grad student who somehow got himself into a mock metagenomic project (there will be an... -
Discrepancy between Qbit quant & read count - possible contamination?
We are performing MinION sequencing of DNA extracted from fresh water samples.
We got some preliminary results that suggested possible contamination,... -
Why do some gene prediction tools represent the coding region in HMM with 6 states?
Some gene prediction tools such as FragGeneScan use a 6-periodic HMM (di-codon) to represent the coding region.
Why do these tools choose a 6-periodic...Last edited by Mia Blige; 05-09-2021, 08:24 AM. -
PacBio Metagenomics Webinar
Register to Attend: https://programs.pacificbiosciences....1-02-14/42m9qg
An ongoing challenge in microbiome research is achieving... -
Question: Metatranscriptome binning
Hi Everyone!
We work with a lignocellulose-degrading microbial consortia. Within a time-series experiment of an enriched culture, we perform... -
Microbiome and Metagenome Data analysis workshop, April 1-5, 2019
Ceske Budejovice, Czech Republic, See here for full event details and apply online
This workshop covers microbiomics / metagenomics analysis... -
Microbiome and Metagenome Data analysis workshop, June 4-8, 2018
Ceske Budejovice, Czech Republic, See here for full event details and apply online
This workshop covers microbiomics / metagenomics analysis... -
Microbiome and Metagenome Data analysis workshop, June 4-8, 2018
Ceske Budejovice, Czech Republic, See here for full event details and apply online
This workshop covers microbiomics / metagenomics analysis... -
Best tool to find gene variants in metagenome data
hey ,
I was wondering did some body know any tools to find gene variants in metagenome data? I know about the freebayes and GATK, but... -
Workshop: Metagenomics Analysis with MEGAN6
Metagenomics Analysis with MEGAN6
Learn how to use the most powerful interactive microbiome analysis tool
When?... -
Studying soil microbial communities
I will sequence DNA and RNA from grassland soils using Illumina HiSeq to see differences in composition and functionality (removing 16S). I will use DNA... -
Spiked-in control for microbiome
Hello! I am helping out with a microbiome project and my collaborators have had a problem that can best be explained by a sample naming error at the... -
shorter contigs after binning and reassembly
Hello friends, maybe you can help me with this.
I have a coassembly of two metagenomes, from which I can retrieve the contigs that belong... -
Pooling across lanes and depth
Hi All,
I'm sequencing ~36 metagenomes and I'm thinking about how to get the best coverage.
The easiest thing would be to pool all...Last edited by darthsequencer; 04-24-2016, 02:33 PM. -
MG-RAST - Alignment parameters of their process statistics?
After analyzing a metagenomic sample with MG-RAST, you go typically to the Metagenome Overview page to see how it performed.
At sections...
