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I am quite new in programming. Recently I have tried to analyze RNA methylation using the MeRIP-PF protocol described by Yuli Li et al....
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MeRIP-PF method for RNA methylation
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SNP and indel calling in Bisulfite data
I am working on a bisulfite-treated sequence and I am interested in the SNP, indels, and methylated sites. I have used Bismark and bowtie2 to map the...
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rghan started a topic Is methylation data gathered from bisulfite sequencing noisy between biological reps?in EpigeneticsIs methylation data gathered from bisulfite sequencing noisy between biological reps?
I have a question regarding the noise between biological replicates in bisulfite sequencing experiments. From the papers that I have read, they usually...
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Bis-SNP: An accurate SNP and methylation calling tool for Bisulfite-Seq/NOMe-seq/RRBS
Why we develop Bis-SNP?
Identification and proper handling of SNPs in Bisulfite-seq are important for accurate quantication of methylation...