Dear All,
I am running Cufflinks on RNAseq data from 2 samples. The parameters I have used for both the samples are
--frag-bias-correct...
2 results in 0.0029 seconds.
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Cufflinks missing transcript assembly in random genomic loci
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Cufflinks cannot detect some transcripts without -g ref.gtf
After I handled fastq files from Illumina pair-end strand-specific RNA-seq by Bowtie and Tophat and Cufflinks, I found the Cufflinks cannot detect some...
