Hi,
I generated a multiple alignment of 3 bacterial genomes with MUGSY. I am interested in identifying which nucleotide positions in the 3 genomes...
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Query a multiple alignment file
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Converting Mugsy output (MAF) to other formats, problems with +/- strand, overlaps
I am aligning bacterial draft genomes to a reference genomes using mugsy v1.2.3, and I'm using the branch of Biopython that supports MAF files to parse...