Hello,
I am starting to use Tophat (latest build) to map RNA seq reads (human) and I am trying to understand some of the results which I am seeing....
4 results in 0.0021 seconds.
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Why Tophat calls as unique reads which clearly map to many locations?
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BWA XT:A:U and XA for same read?
Apologies if this has been asked before, but I can't see an answer and can't seem to figure this out.
Looking at the BWA documentation... -
Guide Trees for 100K sequences and Custom PSSMs
Hi,
I have a group of antibody sequences that I know should not produce insertions or deletions as I know they come from the same ancestor.... -
multiple alignments with BWA
The manuscript "Fast and accurate short read alignment with Burrows–Wheeler transform" says this:
"It [BWA] performs...
