Hi everyone,
Really excited to be a part of this community. I am one of the team members of BioBox Analytics. We're a group of former...
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Mutational Analysis: Identifying SNVs on demand
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GATK4 (4.1.2.0) Mutect2 --germline-resource option
Hi everybody,
I am new analyzing WES and I try GATK4 workflow for the detection of somatic variants.
I run Mutect2 in tumor-only... -
Differences in using default and custom interval list (-L) for exome seq?
In exome sequencing, specific interval list (-L) is used by each company to capture particular region. But all exome in the genome will be in particular... -
mutect2 in a targeted region
Hi all,
I am using Mutect2 to call variants from exome seq samples (tumor/normal pair). I amusing the -L flag to call only in the targeted exome...
