Hi folks,
I have got data generated from 2x250 bp with 350 bp insert for fungal genome assembly. I got very good results from SPAdes,...
22 results in 0.0021 seconds.
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Please help with assembly 2x250 bp with 350 insert
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Convert paired-end, longer reads to single-end, shorter reads
Hi,
Possibly a very dumb question, but if I have a dataset of paired-end, 150bp reads, but a computational tool that is formatted to analyze single-end... -
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I have performed a metagenomic assembly from Ion-Proton reads. Now I want to check my assembly using Cytoscape for probable misassembles.... -
converting scaffold to bam file
hi
I have denovo assembled scaffold of a crop plant (genome seq not avaliable, only scaffold are avaliable online).
Is there any... -
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Alignment of multiple sequences to one (fixed) reference
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I have a reference sequence, which is shorter than the sequences I want to align. The first sequence is my reference, so it should be more... -
Next Generation Sequencing Analyst, Marshall University, Huntington, WV USA
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Can anybody give... -
How to get TCGA transcript isoforms sequences ?
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I've downloaded the breast cancer RNA-seq2 data from TCGA. it's contain the isoform of the genes .
I'm looking way to get...Last edited by watermark; 02-25-2014, 08:04 AM. -
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Create new Reference by merging SNV list with reference genome
Hello,
I would like to create incorporate a list of 5 million single base variants (SNVs) into an existing reference sequence resulting... -
Genomic Sequence Database vs Chromosomal sequence database ?
I am doing some experiment with BowTie 1. Now, I want to give BowTie the whole human genomic database as input. However, I have 22 chromosomal sequence...
