Trying to use bwa mem with the -R option to add read group headers to the alignment output in one step, but it keeps coming back with the error:
...
5 results in 0.0021 seconds.
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BWA change mismatch penalty between N-mismatch and base-mismatch
Dear all
I am trying to use BWA with different penalty score between N mismatch and a base mismatch [ACTG]. Is there any software option that fits... -
Novoalign options
Hello Group,
I've been trying to find the optimal parameters for aligned bisulfite treated 76bp PE reads to a small reference that includes... -
ssaha2/ssahaET/smalt options for 454 titanium reads?
Hi 2 all,
I'm trying to map transcriptomic reads obtained with 454 GS FLX Titanium tecnology to a reference genome (very, usual, no big deal)...Last edited by eni; 04-07-2010, 10:15 AM. -
Breakdancer options
Could anyone please enlighten me on the right format to specify options for BreakDancerMax?
I've tried various ways of putting up options...
