I used STAR to map paired-end reads onto the reference genome:
Code:
~/apps/STAR/bin/Linux_x86_64/STAR --runMode
4 results in 0.0021 seconds.
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cufflinks does not understand strands?
Dear All,
I used STAR to map paired-end reads onto the reference genome:
... -
Brainstorming: Error sources for Cuffquant failure: Map Mass: 0.00
Hello folks,
I have an issue with Cuffquant v2.2.1, which fails to quantify the expression (create .cxb files) of the current RNA-seq I am...Last edited by Thias; 07-22-2016, 02:33 AM. -
sequencing paired-end and mate-pair libraries in a single lane?
Hi folks,
We are new to genome sequencing, but we want to sequence fungal genomes using Hiseq. We were wondering if it is possible to... -
Paired end RNA-seq library preparation question
Hi there,
I am gonna work on gene expression profiling in a non-model plant species, my advisor suggested using ScriptSeqTM Complete Kit*(plant)...Last edited by happye321; 10-04-2015, 08:55 AM.
