Hi everyone,
I'm novice doing reciprocal blast and I have spent a lot of time trying it. I don't know how to do a reciprocal blast and...
11 results in 0.0029 seconds.
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Reciprocal Blast & Parse and Collect best hits
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Reciprocal Blast & Parse and Collect best hits
Hi everyone,
I'm novice doing reciprocal blast and I have spent a lot of time trying it. I don't know how to do a reciprocal blast and... -
error unable to parse known snp
I try to use 454 mapper with the SNP file from ucsc.
it begins the mapping but then there is an erroe:
" unable to parse known snps... -
Need help to edit multiple sequence alignment?
I have a large concatenated protein multiple sequence alignment. One of the species have many undetermined 'X' amino acid. Such column will probably not... -
Copy the column and paste it with special character
Hi all,
I have a input file like
C3905550 oder CDS 68 646 . - . asmbl_487
C3905550... -
Extracting the pattern not matching
Hi there,
I have a list of sequence id and I am trying to extract the sequences from the proteome of the organism using these ids. I used... -
Tophat 2 error: Parse error at line 297359: missing colon in auxiliary data
Hi,
I am getting the following error for one of my samples processed using tophat 2.0.6 (16 out of 17 samples worked fine), has anyone... -
parsing bam
Hi,
I recently concatenated many 200nt sequences to the end of each other; these sequences were from different parts of genome. Then I... -
How can I parse these reads
...Code::::::::::::::: 0H.ptFlagstat.txt :::::::::::::: 49080460 + 0 in total 0 + 0 duplicates 6444347 + 0 mapped (13.13%:nan%)
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Easy library to read and write genomic files
Hi guys !
I just finished work on a python package that can read most of the genomic file formats such as BED, WIG, GFF, BedGraph in a... -
Help with FASTA parsing code.
Hi guys!
I'm working on a project where I am reading in values from a text file and then using them as search terms in a FASTA file. Ideally...
