Hi everyone
I have a set of coding variants, on which I want to run some protein protein interaction tools. I've used a couple of resources...
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Alternatives to Broad's DAPPLE tool
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String Protein-Protein Interactions
Hello,
Does String (http://string-db.org/) protein interaction analyses provide any information on the connectivity to a second list of... -
mapping pathways to refseq IDs
Hi,
I have several annotated bacterial genomes, and would like to map pathway information to the coding sequences in each genome. In the... -
clusterProfiler a tool for GSE analysis
Hi,
currently I am using clusterProfiler for gene set analysis and pathway analysis. but it seems some of the functions in the manual cannot... -
pathways differential expression analysis with KO
Hello!
I assigne K0 onthology to my genes from bacteria metatranscriptome. Now I'd like to carry out a differential expression analysis. Obviously,... -
Webinar on Integrated Pathway analysis in Strand NGS
Webinar of the Month - August 2014
Integrated Pathway Analysis in Strand NGS
Strand NGS (formerly Avadis NGS) supports functional analysis... -
August 2014 Webinar-Integrated pathway analysis in Strand NGS
Webinar of the Month: Integrated pathway analysis in Strand NGS
Presenter: Dr Veena Hedatale, Senior Application Scientist, Strand Life... -
Parsing ./spoNA.xml file failed, please check the file!
I am trying the pathway analysis from this workflow (1). I recieve error that parsing some file failed! Other question I have is, if it is enough to just... -
PhD Studentship
UNIVERSITY OF ULSTER
PhD Studentship in Biomedical Sciences
Applications are invited for a funded PhD studentship tenable...Last edited by swatterson; 01-20-2014, 04:50 AM. -
BioLayout Express3D Version 3.1 Released
The BioLayout team is pleased to announce the release of BioLayout Express3D version 3.1, a powerful tool for the visualization and analysis of network... -
RNA-Seq Pathway and Gene-set Analysis Workflows in R/Bioconductor with GAGE/Pathview
The gage package (2.12.0) now includes a new tutorial, "RNA-Seq Data Pathway and Gene-set Analysis Workflows". Note you need to update to current...Last edited by bigmw; 10-21-2013, 03:52 PM. -
Mapping reads against metabolical maps
I need to make a functional analysis of a metagenome and therefore have to map a lot of color space SOLiD reads 75 bp each (sadly, assembly isn't any... -
Installing SEAS for Pathway Analysis of Differentially Expressed Genes
Hello SeqAnswers Community,
I am interested in using SEAS to do pathway analysis of my differentially expressed genes. I think I have installed... -
Questions about pathway analyses of genes with somatic mutations
Hi all
!!
I sequenced cancer exomes matched with normal exomes, then after alignment follwed by de-duplication, I extracted significant... -
Webinar of the Month: Pathway Analysis in Avadis NGS
This August, find out how to perform Pathway Analysis on your next-gen sequencing analysis results in Avadis NGS!
Learn how to:
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