Many thanks for reading my question.
Recently, I want to align multiple sequences from different genomic regions with the whole genome...
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How to align multiple genomic regions simultaneously
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dacotahm started a topic Comparative Genomics - Make phylogenetic tree of species with available NCBI genomesin GeneralComparative Genomics - Make phylogenetic tree of species with available NCBI genomes
Hello,
I'm doing some comparative genomics and NCBI's taxonomy browser is useful for screening species with genomes available. I want...
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Construct phylogenetic tree from SNP data?
Hello,
I need to construct phylogenetic tree using SNP data.
Lets say, 100 samples with 50 SNPs.
Is there any software? ...
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trimming phylogenetic tree
Hello,
I have a question regarding trimming a phylogenetic tree. In particular, I would like to delete a list of terminal nodes from the...
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Postdoctoral Position (16 months) in Computational Biology, Lille France
Guided phylogenetic comparative genome assembly
We propose to combine a sensitive read mapping process with a multiple reference set, with...
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How to get conservation of vaccine candidates between hundreds of bacterial strains?
Hi community,
We have identified vaccine candidates via an ex-vivo RNA-seq approach. Next step would be to perform conservation of these...
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Phylogenetics Tool
Hi,
I am working on a project and I need to know which ever phylogenetics tool ( based on the bayesian inference) is most in use and considered...
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Genome resequencing and phylogenetics
Hello,
I have resequenced 54 closely-related strains of yeast and now I would like to assemble them into a phylogenetic tree just to make...
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How to do phylogenetic analysis with 25000 sequences?
Hi,
I'm trying to employ 454 in phylogenetic research. We have 10 different sequences (markers) amplified among 19 species (ca. 1/16 plate) for...