Hi all.
After finish assemble fungus genome from pacbio sequel using SMRT link or Falcon assembler, the genome size is twice as much as I...
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Ploidy estimation or decision using pacbio sequel data
Last edited by yjpark1091; 04-22-2018, 11:01 PM. -
Genome assembly of mixed E. coli samples
I have a question about assembling mixed samples, where the organisms sampled are very similar. We usually sequence pure isolates but in a particular... -
Can't run GATK HaplotypeCaller set ploidy = 1
Greetings!
I have been attempting to call variants on a haploid genome using GATK HaplotypeCaller, however when I set ploidy = 1, I get... -
Apicomplexa (Plasmodium spp.) SNP analysis - ploidy
Dear All,
I am learning SNP analysis to be carried out on Plasmodium parasites. These parasites have a diploid state in the mosquito, but... -
Copy number variation..on chromosome level...or ploidy with sequencing
I was wondering if we can use low coverage sequencing to detect the copy number variation. I am not interested in gene level or micro level but rather...
