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krawitz started a topic VCF multiple records with the same POS, why?

in Bioinformatics

01-26-2013, 09:40 AM
VCF multiple records with the same POS, why?

Hi,
I stumbled upon two entries in the VCF of NA12878 with the same position. I thought this is not allowed. I checked the vcf specifications...

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yuchioj started a topic How to get a numeric vector of POS?

in Bioinformatics

10-10-2012, 01:33 PM
How to get a numeric vector of POS?

Hi all

Fairly new in using Samtools. Any idea on how to get a numeric vector of the postion of the first matching base? Already threw away...

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