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Jane Lee started a topic contig mapping reference blat psl result handle

in Bioinformatics

06-19-2013, 07:31 PM
contig mapping reference blat psl result handle

I mapped my resequencing contigs to the reference which is the same species with blat to locate these contigs, than I want to join the ordered contigs...

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Azazel started a topic PSL to BED?

in Bioinformatics

12-05-2012, 02:49 AM
PSL to BED?

How can I convert output from Jim Kent's BLAT, which is in PSL format, into BED format?

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