Hello everyone,
I am dealing with NGS data for the first time, so I am very new to everything. When I was looking for a read mapper for...
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What RNAseq mapper to use?
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Rsamtools memory leak
Hi there,
I've just updated Rsamtools to the latest version ("1.22.0") and I've noticed a weird memory leak that is crashing...
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Importance of number of cores when buying big RAM server
Hello,
We are planning to add a 1 TB RAM node to the cluster at my institution (currently 10 nodes 64-256 GB RAM each). We are going this...
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RAM limitation on trinity using DIAG computational resource
Hi,
Any one used DIAG grid resource to run trinity? I am wondering what is maximum RAM request in grid.
Since trinity...Last edited by sckinta; 08-12-2014, 11:23 AM.
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Trinity RAM issue
Hi,
Having managed to whittle down my Illumina data to 31 million reads, I am trying to run Trinity with 16 CPUs and 16 gigabytes of RAM....
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Cufflinks timing out - computing power required?
I am analysing human transcriptome data (Illumina) via the Tophat -> Cufflinks pipeline (v2.0.2) using iGenomes references. My dataset comprises 14...
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Large RAM Requirements and Clusters/Clouds
Hello people of the forum, I'm new here and am hoping you all can help me with a hypothetical.
Let's say I have access to a cluster, or...
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Bioinformatics Computer: List your specs
Hi All,
In reading the forums, it seems like many people are having questions that involve computer power... How much RAM, how many processors,...