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Egansbay started a topic Is there a manual way of producing Rarefaction curves?

in Illumina (Solexa)

01-21-2015, 01:51 AM
Is there a manual way of producing Rarefaction curves?

Hi everyone

Just wondering if there's an easy way to produce rarefaction curves from simple 16S V4 amplicon read abundance data from MiSeq?...

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OliverDeusch started a topic Species abundance and rarefaction in metagenomics data

in Metagenomics

12-13-2012, 07:57 AM
Species abundance and rarefaction in metagenomics data

Hi,

I am doing a rarefaction analysis on a metagenomics dataset and ran into an issue. I will briefly describe the dataset before I ask...

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BioGenomics started a topic Rarefaction/saturation curve based on NGS data

in Bioinformatics

12-08-2010, 07:41 PM
Rarefaction/saturation curve based on NGS data

Hi all,

most likely a simple question, but I'm looking for a tool (software, python/Perl/R script) that produces a rarefaction curve base...

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