Hi,
Given a Jellyfish output, I would like to estimate the overall sequencing error rate. We assume that the unique k-mers in this data...
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Overall sequencing error rate estimation
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Heterozygous rate from "de novo" sequencing
Hi,
I've just tried to calculate the heterozygous rate of my seq data, but no luck using gce or even preqc from sga using kmer information.... -
Illumina GAIIx sequecing error rate (background)
Hi guys,
We are using NGS to detect non-clonal, low frequency mutations, so we are quite concerned about the background the sequencer introduces,...
