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WGCNA Workflow from GEO FASTQ Files – Expression Type, Sample Inclusion, and Preprocessing
Hello, I’m new to bioinformatics and would appreciate some guidance on the general workflow for WGCNA analysis in disease studies. If there are any...
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Assembling raw reads with Canu, but without correction
Hello friends,
I have raw ONP and PacBio reads for the human genome, ecoli, and yeast, and I want to test Canu's performance on them, without...
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Obtaining .CIF or raw images from HiSeq/NextSeq?
Hi,
Illumina recently changed the data flow inside their HiSeq and NextSeq machines to reduce I/O burden during sequencing dramatically....Last edited by Hyeshik Chang; 07-21-2015, 09:49 PM.
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bioscope ma to bam conversion
Hello
I have got a question related to the ma2bam conversion.
Is it somehow possible the output the raw read sequence and...
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wig file compression
Hi,
I have written a script to produce wig files from Eland aligned output, however the files are mostly too large to load onto UCSC for...