I am getting conflicting information on how to assign RG ID, LB, PU, SM for an exome analysis I am working with.
Can someone just clarify...
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Confused about RG ID LB even after reading all posts/GATK best practices
Last edited by Studentlost; 03-05-2016, 08:06 PM.
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bwa mem -R option
Trying to use bwa mem with the -R option to add read group headers to the alignment output in one step, but it keeps coming back with the error:
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