My script is:
Code:
cuffdiff -p 12 -o ./diff_out -b /ichec/work/nglif015b/nick/bowtie/bowtie-indexes/Laevis_7/Xl7.fasta
2 results in 0.0030 seconds.
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Cuffdiff problems
I'm running Cuffdiff v2.1.1 and am running into problems:
My script is:
... -
Tophat segment length setting
Hi, all
I use tophat to align my RNA-seq reads to genome. By default, the segment length is 25, and my RNA-seq read length is 101bp, so Tophat...
