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jackfrost started a topic Time frame for BLASTN against NT

in Bioinformatics

06-11-2015, 10:31 AM
Time frame for BLASTN against NT

Hi Everyone,

I'm trying to find out a time frame I should expect for running blastn. I have about 50k sequences that I want to run against...

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CindyF started a topic Run Time Performance of Variant (SNP) Calling Tools?

in Bioinformatics

09-12-2013, 08:56 AM
Run Time Performance of Variant (SNP) Calling Tools?

Hi all,

I read lots of papers about SNP calling and the different implementations (GATK, SAMtools, SOAPsnp, etc) in the last time. Something...

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vivek_ started a topic Run times with CNVnator

in Bioinformatics

07-20-2012, 07:13 PM
Run times with CNVnator

Hi,

If anyone has run CNVnator before for cnv detection can you give me an idea of the approximate run time for the steps?

...

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