Hello everyone,
I created a bowtie index from a fasta file which was merged from 4 individual fasta file. One is from miRBase, two from RFAM...
6 results in 0.0021 seconds.
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Probelem with SAM file created by Bowtie2
Last edited by newfie; 09-21-2016, 09:25 AM. Reason: one output file name was not mentioned correctly -
Help installing/running TopHat and Cufflinks
I need to use TopHat and Cufflinks, for which I must obtain Bowtie2, Boost, and SAM tools. I have managed to successfully install Bowtie2, but I've had... -
extremely large vcf file generated using sam tools
Hi,
This is my first time to Samtools. I tried to create .vcf files for my bam files of my paired-end RNA seq samples. I used
...Last edited by janaahan13; 12-18-2012, 09:46 PM. -
Chimeric reads hard clipping
Hello, everyone. I got a question without answer after a long exhaustive liaterature search. I am using multiple displacement amplification (MDA) to amplify... -
tool to merge pileup
hi
I need to merge pileup from multiple samples, do we have an open source tool to merge multiple pileups.
Thanks
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Assemble Massive Datasets with Geneious Server
Next Generation Sequencing analysis just got a whole lot easier. The new scheduling tools in Geneious Server™ 1.1 coupled with the massive dataset handling...
