Hi All,
I am trying to get an SRA file which contains alignment information. I want to use sam-dump to get the relevant sam/bam file.
I...
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How to download an SRA file containing alignment information from public repository
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Trouble with SRA toolkit sam-dump
I catch a SRA file from NCBI
and i can convert that file to .fastq by using fastq-dump
but when i use sam-dump an error happened... -
sam-dump -u from sra file fails to output unaligned reads
Hi,
I downloaded an sra file of whole exome seq.
When trying to convert it to a sam file I use the -u flag to get the unaligned reads. However,...
