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martin2801 started a topic 10x genomics 3'RNA-seq dual indexing

in Illumina (Solexa)

01-21-2020, 06:22 AM
10x genomics 3'RNA-seq dual indexing

Hello,

so I had a discussion with the 10x Genomics support people about sequencing the v3 chemistry 3'RNAseq libraries on a HiSeq3000/4000...

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akitrav1 started a topic drop-outs in Cell-Ranger

in Bioinformatics

01-30-2019, 11:10 AM
drop-outs in Cell-Ranger

Has anyone worked with CellRanger pipeline here? How does CellRanger account for drop-out events? Does it just filter them out or does it impute the missing...

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