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hugomarquez started a topic Can regular single end sequencing tell the transcription of genes in a strand-specifi

in Illumina (Solexa)

12-10-2014, 03:08 PM
Can regular single end sequencing tell the transcription of genes in a strand-specifi

Just a very basic question (maybe too easy). Can regular single end sequencing tell the transcription of genes in a strand specific manner?

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ct586 started a topic rmdup can not move duplicates in forward and reverse strand for single-end reads

in Bioinformatics

03-11-2012, 06:35 AM
rmdup can not move duplicates in forward and reverse strand for single-end reads

Hi, I have a sam file produced by BWA for single-end reads.

There is one type of results like the following:
...

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Last edited by ct586; 03-11-2012, 06:41 AM. Reason: To make the words more accurately

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