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frymor started a topic junction bed file from STAR

in Bioinformatics

09-22-2015, 02:50 AM
junction bed file from STAR

Hi everybody,

I am trying to create a junction file from the SJ.out.tab file of the STAR aligner.
I would like to see only those...

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ebe started a topic RNA-Star : SJ.out.tab differents according to 'outFilterType' value?? and

in Bioinformatics

09-16-2015, 08:02 AM
RNA-Star : SJ.out.tab differents according to 'outFilterType' value?? and

Hello,

we are using RNA-Star to our project (thank to authors!).
I don't understand a difference observed about the SJ.out.tab files...

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cbaudo started a topic 2nd Pass Alignment with STAR for RNA-sequencing

in RNA Sequencing

03-03-2015, 08:31 AM
2nd Pass Alignment with STAR for RNA-sequencing

Hello everyone,

Firstly, thanks for reading this post. I'm performing 2nd pass alignment with STAR and I was wondering how to merge SJ.out.tab...

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