Hi all,
I am very new to fusion-gene discovery and I am tasked along with some fellow colleagues to apply bioinformatic methods on clinical...
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Fusion-gene finding (in search for THE read-length)
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impact of mutations in splicing sites
hi,
I would like to score the impact of mutations occurring in gene regions that the variant effect predictor state as 'splice_variant'....
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TopHat 1.3.0 Splicing Bug ?
Hello,
I was getting some strange results with cufflinks, where exons were being called as separate transcripts, so I delved deeper, and...
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New: updated SpliceMap supports SAM format/cufflinks
Hi SEQanswers Community,
SpliceMap has received significant updates, with numerous bugs fixed. If you were having trouble with the old...Last edited by john_mu; 05-20-2010, 05:38 PM.
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New: updated SpliceMap supports SAM format/cufflinks
Last edited by john_mu; 05-20-2010, 05:28 PM.
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mRNA seq 75bp splice file
Illumina provides a human.49.splice ELAND_RNA_GENOME_SPLICE file for 50bp reads. Does someone have the same file for 75bp reads?
There...