RNA-Seq Data Analysis Workshop
Quality Control, Read Mapping, Visualization and Downstream Analyses
When?
March 2 - 5, 2020...
6 results in 0.0041 seconds.
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RNA-Seq Data Analysis Workshop (March 2 - 5, 2020 in Berlin, Germany)
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RNA-STAR filter out unique Junctions
Hi all,
I am trying to filter un-annotated splice junction from my STAR mapping run, but with no success.
I would like to exclude... -
How to get reads for a particular splice junction – TopHat and BEDTools
Does anyone have a quick way of getting all the reads that correspond to a particular splice junction? I’ve mapped my RNA-seq data with TopHat, made... -
bowtie2 vs. TopHat
hello everyone,
I have been using Bowtie2 for Illumina 100x2 RNA-Seq datasets. I understand TopHat was built as Bowtie (older version) couldn't... -
SpliceMap 3.3.3.x released: Tool for spliced read alignment
Hi Everyone,
SpliceMap 3.3.3.x has been release with many user requested features and stability/reliability enhancements.
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HMMSplicer : new software for finding splice junctions in RNA-Seq data
The DeRisi lab is pleased to release HMMSplicer to the community. This open-source software package discovers splice junctions in RNA-Seq datasets without...
