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bgu started a topic dindel stage 4 for pooled samples

in Bioinformatics

12-18-2012, 06:46 AM
dindel stage 4 for pooled samples

How to set the --numBamFiles and --numSamples parameters for the fourth step in a dindel analysis of pooled samples.

I have 27 individuals...

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Last edited by bgu; 12-18-2012, 01:30 PM. Reason: Run with --numBamFiles ended
bnfoguy started a topic Dindel Realining Reads

in Bioinformatics

06-26-2012, 09:20 AM
Dindel Realining Reads

Hello,

I am using to call indels from cancer data. So far I have been successfull with Stage 1, 2 & 3. When I try to use the mergeOutpuDiploid...

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