Hi Everyone,
I would like to ask for some advice about statistics for situations where we want to compare sequencing tag density profile...
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Which statistics are used for sequencing tag density profiling on gene bodies?
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DEG analysis between distant species
Hi all,
I am recently thinking about how to implement DEG analyses on two distant species. My idea is to get the expression values (like... -
Significance of Overlapping Regions
I have two bed files of genomic coordinates. (say 12000 entries in one, 1000 in the other) I know how many unique bases in the genome are covered by each... -
Probability of Occurence
How do I determine the if the overlap of genetic mutations, ex: copy number variants (CNVs) with a particular set of genomic regions is more than expected... -
Bimodal Distribution of Mismatch Frequencies in Illumina
I created a pileup file using Maq. If I look at the log transformed distributions of frequencies of mismatch for each nucleotide across all positions,... -
MicroArray and Sequence Analysis
Dear Fellows, I am a Perl programmer and good in Biology too, however, I am very interested to know more about Sequence analysis and microarray data analysis,...
